The mGAP resource is the first public website providing searchable, annotated macaque variant data and includes a catalog of high confidence variants derived from whole genome sequence from hundreds of rhesus macaques processed in a consistent manner. A custom pipeline was developed to enable annotation of the macaque variants, leveraging human data sources that include regulatory elements, known disease- or phenotype-associated variants, predicted impact, and sequence conservation. The mGAP resource (https://mgap.ohsu.edu) presents an unprecedented opportunity to investigate potential genetic associations with currently characterized disease models and to uncover new macaque models based on parallels with human risk alleles.

